www/www.studyforrest.org
10
0
Fork 0
Code Issues 6 Pull requests Packages Activity Actions

Cleanup explore, reduce competition with data types page #32

Merged
mih merged 1 commit from explore into uplift 2025-08-19 08:44:07 +00:00
Conversation 0 Commits 1 Files changed 1 +18 -16
1 changed files with 18 additions and 16 deletions
Download patch file Download diff file Expand all files Collapse all files

34
content/pages/explore.html
View file

@ -5,7 +5,16 @@
<meta name="url" content="explore.html" />
</head>
<body>
<h2>Hairy Brain</h2>
<p>The dataset comprises many different data types, ranging from brain
imaging modalities, to eye tracking, and measurements of heart beat
and breathing. This page offers a glimpse into some of these data type
and a few quality metrics used to investigate the utility of the dataset.
A comprehensive assessment can be found in associated data papers that
are available for every dataset component listed on the
<a href="/data.html">Data Page</a>.</p>
<h2>The "Hairy" Brain</h2>
<p>Diffusion-weighted imaging (DWI) is a technique that can be used to
visualize neural tracts or <strong>nerve fibre bundles</strong> by
measuring the direction of water diffusion in brain tissue. The example
@ -17,18 +26,7 @@
lower center of the image show the <a href="http://en.wikipedia.org/wiki/Pyramidal_tracts">corticospinal tract</a>,
where the brain is connected with the nervous system in other parts of the
body. The provided scans have been made with a standard clinical procedure
at 2 mm spatial resolution. For more more information on this image type,
see <a href="http://en.wikipedia.org/wiki/Diffusion_tensor_imaging">Wikipedia</a>.
The complete description of this acquisition has been published in:</p>
<blockquote>
Hanke et al. (2014). <a href="http://www.nature.com/articles/sdata20143">A
high-resolution 7-Tesla fMRI dataset from complex natural stimulation with an audio movie</a>.
Scientific Data, 1.
</blockquote>
<p>Click on the image to load an interactive viewer to study the complex
three-dimensional structure of the connectome.</p>
at 2 mm spatial resolution.</p>
<div id="xtk_renderer">
</div>
@ -55,8 +53,12 @@
load_xtk_renderer();
</script>
<h2>NeuroVault Goodness</h2>
<p>TODO: write intro; attribute NeuroVault appropriately</p>
<h2>The colorful world of brain function</h2>
<p>One way to analyze brain function is to contrast where the brain consumes
oxygen differently between particular conditions. A number of such analysis
result have been published on the <a href="https://neurovault.org/">NeuroVault</a>
platform to enable further meta-analysis. Browse through the topics and
see how individual brain areas responds differently.</p>
<div id="nv_picker">
<p><input type="radio" name="neurovault_ds" id="nv_308" value="308" checked>
@ -130,7 +132,7 @@
<h2>Functional data quality</h2>
<p>Since head movement during the acquisition of a functional MRI time series can be
detrmental for the eventual data analysis and results, volume-to-volume head movement
detrimental for the eventual data analysis and results, volume-to-volume head movement
parameters are typically inspected as a quality indicator of fMRI data. Framewise
displacement (FD) captures head movement in a single value per volume, resulting in an
FD time series per functional run. Below we present interactive distribution plots of