Stephan Heunis
a7ded698d2
Move some files to 'outputs' add shacl group data to 'data', to be used for generating ui-annotated shacl shapes generate a shacl shapes graph from the neurobagel annotated sdd schema generate minimal owl from the neurobagel annotated sdd schema All of these outputs can now be used as inputs to shacl-vue
330 lines
No EOL
9 KiB
Text
330 lines
No EOL
9 KiB
Text
{
|
|
"@context": {
|
|
"nb": "http://neurobagel.org/vocab/",
|
|
"snomed": "http://purl.bioontology.org/ontology/SNOMEDCT/",
|
|
"nidm": "http://purl.org/nidash/nidm#",
|
|
"cogatlas": "https://www.cognitiveatlas.org/task/id/",
|
|
"ncit": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#",
|
|
"Acquisition": "nb:Acquisition",
|
|
"identifier": "@id",
|
|
"hasContrastType": {
|
|
"@id": "nb:hasContrastType"
|
|
},
|
|
"schemaKey": "@type",
|
|
"Assessment": "nb:Assessment",
|
|
"Bagel": "nb:Bagel",
|
|
"BaseModel": "nb:BaseModel",
|
|
"ControlledTerm": "nb:ControlledTerm",
|
|
"Dataset": "nb:Dataset",
|
|
"hasLabel": {
|
|
"@id": "nb:hasLabel"
|
|
},
|
|
"hasPortalURI": {
|
|
"@id": "nb:hasPortalURI"
|
|
},
|
|
"hasSamples": {
|
|
"@id": "nb:hasSamples"
|
|
},
|
|
"Diagnosis": "nb:Diagnosis",
|
|
"Image": "nb:Image",
|
|
"ImagingSession": "nb:ImagingSession",
|
|
"hasFilePath": {
|
|
"@id": "nb:hasFilePath"
|
|
},
|
|
"hasAcquisition": {
|
|
"@id": "nb:hasAcquisition"
|
|
},
|
|
"PhenotypicSession": "nb:PhenotypicSession",
|
|
"hasAge": {
|
|
"@id": "nb:hasAge"
|
|
},
|
|
"hasSex": {
|
|
"@id": "nb:hasSex"
|
|
},
|
|
"isSubjectGroup": {
|
|
"@id": "nb:isSubjectGroup"
|
|
},
|
|
"hasDiagnosis": {
|
|
"@id": "nb:hasDiagnosis"
|
|
},
|
|
"hasAssessment": {
|
|
"@id": "nb:hasAssessment"
|
|
},
|
|
"Session": "nb:Session",
|
|
"Sex": "nb:Sex",
|
|
"Subject": "nb:Subject",
|
|
"hasSession": {
|
|
"@id": "nb:hasSession"
|
|
},
|
|
"SubjectGroup": "nb:SubjectGroup"
|
|
},
|
|
"identifier": "nb:ae53cf4e-9e72-47e3-8aa1-688c212909e0",
|
|
"hasLabel": "JSH synth data 1",
|
|
"hasSamples": [
|
|
{
|
|
"identifier": "nb:6bbdbeeb-d6a6-4728-a57b-91413fcaccb4",
|
|
"hasLabel": "sub-01",
|
|
"hasSession": [
|
|
{
|
|
"identifier": "nb:b7805f31-7d8d-4252-8a81-ca5604b24fec",
|
|
"hasLabel": "ses-01",
|
|
"hasAge": 34.1,
|
|
"hasSex": {
|
|
"identifier": "snomed:248152002",
|
|
"schemaKey": "Sex"
|
|
},
|
|
"isSubjectGroup": {
|
|
"identifier": "ncit:C94342",
|
|
"schemaKey": "SubjectGroup"
|
|
},
|
|
"hasAssessment": [
|
|
{
|
|
"identifier": "cogatlas:trm_57964b8a66aed",
|
|
"schemaKey": "Assessment"
|
|
},
|
|
{
|
|
"identifier": "cogatlas:tsk_4a57abb949ece",
|
|
"schemaKey": "Assessment"
|
|
}
|
|
],
|
|
"schemaKey": "PhenotypicSession"
|
|
},
|
|
{
|
|
"identifier": "nb:20a6c41b-b986-4485-ae04-b82ed3e1280e",
|
|
"hasLabel": "ses-02",
|
|
"hasAge": 35.3,
|
|
"hasSex": {
|
|
"identifier": "snomed:248152002",
|
|
"schemaKey": "Sex"
|
|
},
|
|
"isSubjectGroup": {
|
|
"identifier": "ncit:C94342",
|
|
"schemaKey": "SubjectGroup"
|
|
},
|
|
"hasAssessment": [
|
|
{
|
|
"identifier": "cogatlas:trm_57964b8a66aed",
|
|
"schemaKey": "Assessment"
|
|
},
|
|
{
|
|
"identifier": "cogatlas:tsk_4a57abb949ece",
|
|
"schemaKey": "Assessment"
|
|
}
|
|
],
|
|
"schemaKey": "PhenotypicSession"
|
|
}
|
|
],
|
|
"schemaKey": "Subject"
|
|
},
|
|
{
|
|
"identifier": "nb:d1f68c3f-2eb7-4967-9199-24ee2267717b",
|
|
"hasLabel": "sub-02",
|
|
"hasSession": [
|
|
{
|
|
"identifier": "nb:d1b4ea20-e01c-4d87-addf-eb0c040731ac",
|
|
"hasLabel": "ses-01",
|
|
"hasSex": {
|
|
"identifier": "snomed:248153007",
|
|
"schemaKey": "Sex"
|
|
},
|
|
"hasDiagnosis": [
|
|
{
|
|
"identifier": "snomed:406506008",
|
|
"schemaKey": "Diagnosis"
|
|
}
|
|
],
|
|
"hasAssessment": [
|
|
{
|
|
"identifier": "cogatlas:trm_57964b8a66aed",
|
|
"schemaKey": "Assessment"
|
|
},
|
|
{
|
|
"identifier": "cogatlas:tsk_4a57abb949ece",
|
|
"schemaKey": "Assessment"
|
|
}
|
|
],
|
|
"schemaKey": "PhenotypicSession"
|
|
},
|
|
{
|
|
"identifier": "nb:3954bfb1-5fda-4500-9cbd-2782c0a2969a",
|
|
"hasLabel": "ses-02",
|
|
"hasAge": 39.0,
|
|
"hasSex": {
|
|
"identifier": "snomed:248153007",
|
|
"schemaKey": "Sex"
|
|
},
|
|
"hasDiagnosis": [
|
|
{
|
|
"identifier": "snomed:406506008",
|
|
"schemaKey": "Diagnosis"
|
|
}
|
|
],
|
|
"hasAssessment": [
|
|
{
|
|
"identifier": "cogatlas:trm_57964b8a66aed",
|
|
"schemaKey": "Assessment"
|
|
},
|
|
{
|
|
"identifier": "cogatlas:tsk_4a57abb949ece",
|
|
"schemaKey": "Assessment"
|
|
}
|
|
],
|
|
"schemaKey": "PhenotypicSession"
|
|
}
|
|
],
|
|
"schemaKey": "Subject"
|
|
},
|
|
{
|
|
"identifier": "nb:fb2f290b-d4b0-4549-a94b-5d91b36ed3fc",
|
|
"hasLabel": "sub-03",
|
|
"hasSession": [
|
|
{
|
|
"identifier": "nb:e19d5aff-72ac-494c-aeef-63d32e697cd4",
|
|
"hasLabel": "ses-01",
|
|
"hasAge": 22.1,
|
|
"hasAssessment": [
|
|
{
|
|
"identifier": "cogatlas:trm_57964b8a66aed",
|
|
"schemaKey": "Assessment"
|
|
}
|
|
],
|
|
"schemaKey": "PhenotypicSession"
|
|
},
|
|
{
|
|
"identifier": "nb:00deb8d9-d93e-4522-b506-dc9e9bb38950",
|
|
"hasLabel": "ses-02",
|
|
"hasAge": 23.2,
|
|
"hasDiagnosis": [
|
|
{
|
|
"identifier": "snomed:406506008",
|
|
"schemaKey": "Diagnosis"
|
|
}
|
|
],
|
|
"hasAssessment": [
|
|
{
|
|
"identifier": "cogatlas:trm_57964b8a66aed",
|
|
"schemaKey": "Assessment"
|
|
},
|
|
{
|
|
"identifier": "cogatlas:tsk_4a57abb949ece",
|
|
"schemaKey": "Assessment"
|
|
}
|
|
],
|
|
"schemaKey": "PhenotypicSession"
|
|
}
|
|
],
|
|
"schemaKey": "Subject"
|
|
},
|
|
{
|
|
"identifier": "nb:13c2ddfd-f004-49d3-9672-03fa82ad34b0",
|
|
"hasLabel": "sub-04",
|
|
"hasSession": [
|
|
{
|
|
"identifier": "nb:0de62ed8-4a3b-41a6-97eb-5004a9482080",
|
|
"hasLabel": "ses-01",
|
|
"hasAge": 21.1,
|
|
"hasSex": {
|
|
"identifier": "snomed:248152002",
|
|
"schemaKey": "Sex"
|
|
},
|
|
"isSubjectGroup": {
|
|
"identifier": "ncit:C94342",
|
|
"schemaKey": "SubjectGroup"
|
|
},
|
|
"hasAssessment": [
|
|
{
|
|
"identifier": "cogatlas:tsk_4a57abb949ece",
|
|
"schemaKey": "Assessment"
|
|
}
|
|
],
|
|
"schemaKey": "PhenotypicSession"
|
|
},
|
|
{
|
|
"identifier": "nb:66de8655-6394-4c03-813b-207ad3713663",
|
|
"hasLabel": "ses-02",
|
|
"hasAge": 22.3,
|
|
"hasSex": {
|
|
"identifier": "snomed:248152002",
|
|
"schemaKey": "Sex"
|
|
},
|
|
"isSubjectGroup": {
|
|
"identifier": "ncit:C94342",
|
|
"schemaKey": "SubjectGroup"
|
|
},
|
|
"hasAssessment": [
|
|
{
|
|
"identifier": "cogatlas:trm_57964b8a66aed",
|
|
"schemaKey": "Assessment"
|
|
},
|
|
{
|
|
"identifier": "cogatlas:tsk_4a57abb949ece",
|
|
"schemaKey": "Assessment"
|
|
}
|
|
],
|
|
"schemaKey": "PhenotypicSession"
|
|
}
|
|
],
|
|
"schemaKey": "Subject"
|
|
},
|
|
{
|
|
"identifier": "nb:c6b744bf-e466-46e2-a21c-56aa6a5a9d97",
|
|
"hasLabel": "sub-05",
|
|
"hasSession": [
|
|
{
|
|
"identifier": "nb:199a51c8-f0e9-431f-b4f4-8c54bddf6e96",
|
|
"hasLabel": "ses-01",
|
|
"hasAge": 42.5,
|
|
"hasSex": {
|
|
"identifier": "snomed:248153007",
|
|
"schemaKey": "Sex"
|
|
},
|
|
"hasDiagnosis": [
|
|
{
|
|
"identifier": "snomed:406506008",
|
|
"schemaKey": "Diagnosis"
|
|
}
|
|
],
|
|
"hasAssessment": [
|
|
{
|
|
"identifier": "cogatlas:trm_57964b8a66aed",
|
|
"schemaKey": "Assessment"
|
|
},
|
|
{
|
|
"identifier": "cogatlas:tsk_4a57abb949ece",
|
|
"schemaKey": "Assessment"
|
|
}
|
|
],
|
|
"schemaKey": "PhenotypicSession"
|
|
},
|
|
{
|
|
"identifier": "nb:f7b41b2d-95c5-41e8-8c14-a34a2a126c33",
|
|
"hasLabel": "ses-02",
|
|
"hasAge": 43.2,
|
|
"hasSex": {
|
|
"identifier": "snomed:248153007",
|
|
"schemaKey": "Sex"
|
|
},
|
|
"hasDiagnosis": [
|
|
{
|
|
"identifier": "snomed:406506008",
|
|
"schemaKey": "Diagnosis"
|
|
}
|
|
],
|
|
"hasAssessment": [
|
|
{
|
|
"identifier": "cogatlas:trm_57964b8a66aed",
|
|
"schemaKey": "Assessment"
|
|
},
|
|
{
|
|
"identifier": "cogatlas:tsk_4a57abb949ece",
|
|
"schemaKey": "Assessment"
|
|
}
|
|
],
|
|
"schemaKey": "PhenotypicSession"
|
|
}
|
|
],
|
|
"schemaKey": "Subject"
|
|
}
|
|
],
|
|
"schemaKey": "Dataset"
|
|
} |