src/flat-data/unreleased.yaml

@@ -155,6 +155,22 @@ classes:
     slots:
       - name
       - short_name
+    slot_usage:
+      name:
+        recommended: true
+        annotations:
+          sh:order: 1
+      short_name:
+        annotations:
+          sh:order: 2
+      description:
+        annotations:
+          sh:order: 3
+          dash:singleLine: false
+      display_label:
+        recommended: true
+        annotations:
+          sh:order: 4
 
   DataItem:
     class_uri: inm7fd:DataItem
@@ -187,6 +203,22 @@ classes:
     slots:
       - name
       - short_name
+    slot_usage:
+      name:
+        recommended: true
+        annotations:
+          sh:order: 1
+      short_name:
+        annotations:
+          sh:order: 2
+      description:
+        annotations:
+          sh:order: 3
+          dash:singleLine: false
+      display_label:
+        recommended: true
+        annotations:
+          sh:order: 4
 
   Factor:
     class_uri: inm7fd:Factor
@@ -204,6 +236,25 @@ classes:
     comments:
       - The relationship of a factor "level" with the broader factor can be
         described via `broader_mappings`.
+    slot_usage:
+      name:
+        recommended: true
+        annotations:
+          sh:order: 1
+      short_name:
+        annotations:
+          sh:order: 2
+      factor_level_of:
+        annotations:
+          sh:order: 3
+      description:
+        annotations:
+          sh:order: 4
+          dash:singleLine: false
+      display_label:
+        recommended: true
+        annotations:
+          sh:order: 5
 
   Instrument:
     class_uri: inm7fd:Instrument
@@ -218,6 +269,22 @@ classes:
       - short_name
     exact_mappings:
       - obo:OBI_0000968
+    slot_usage:
+      name:
+        recommended: true
+        annotations:
+          sh:order: 1
+      short_name:
+        annotations:
+          sh:order: 2
+      description:
+        annotations:
+          sh:order: 3
+          dash:singleLine: false
+      display_label:
+        recommended: true
+        annotations:
+          sh:order: 4
 
   Protocol:
     class_uri: inm7fd:Protocol
@@ -234,6 +301,22 @@ classes:
       - short_name
     exact_mappings:
       - obo:OBI_0000272
+    slot_usage:
+      name:
+        recommended: true
+        annotations:
+          sh:order: 1
+      short_name:
+        annotations:
+          sh:order: 2
+      description:
+        annotations:
+          sh:order: 3
+          dash:singleLine: false
+      display_label:
+        recommended: true
+        annotations:
+          sh:order: 4
 
   Study:
     class_uri: inm7fd:Study
@@ -254,6 +337,37 @@ classes:
       - implements
       - name
       - short_name
+    slot_usage:
+      name:
+        recommended: true
+        annotations:
+          sh:order: 1
+      short_name:
+        annotations:
+          sh:order: 2
+      implements:
+        recommended: true
+        annotations:
+          sh:order: 3
+      factors:
+        recommended: true
+        annotations:
+          sh:order: 4
+      instruments:
+        annotations:
+          sh:order: 5
+      dimensions:
+        recommended: true
+        annotations:
+          sh:order: 6
+      description:
+        annotations:
+          sh:order: 7
+          dash:singleLine: false
+      display_label:
+        recommended: true
+        annotations:
+          sh:order: 8
 
   StudyActivity:
     class_uri: inm7fd:StudyActivity
@@ -270,6 +384,34 @@ classes:
       - implements
       - study
       - subjects
+    slot_usage:
+      study:
+        required: true
+        annotations:
+          sh:order: 1
+      subjects:
+        recommended: true
+        annotations:
+          sh:order: 2
+      implements:
+        recommended: true
+        annotations:
+          sh:order: 3
+      factors:
+        recommended: true
+        annotations:
+          sh:order: 4
+      instruments:
+        annotations:
+          sh:order: 5
+      description:
+        annotations:
+          sh:order: 6
+          dash:singleLine: false
+      display_label:
+        recommended: true
+        annotations:
+          sh:order: 7
 
   Subject:
     class_uri: inm7fd:Subject
@@ -286,8 +428,30 @@ classes:
       - study
       - subject_type
     slot_usage:
+      study:
+        required: true
+        annotations:
+          sh:order: 1
+      name:
+        recommended: true
+        annotations:
+          sh:order: 2
+      subject_type:
+        recommended: true
+        annotations:
+          sh:order: 3
       specimen_of:
         range: Subject
+        annotations:
+          sh:order: 4
+      description:
+        annotations:
+          sh:order: 5
+          dash:singleLine: false
+      display_label:
+        recommended: true
+        annotations:
+          sh:order: 6
 
   SubjectType:
     class_uri: inm7fd:SubjectType
@@ -298,3 +462,16 @@ classes:
       Classifier for the nature of a subject.
     slots:
       - name
+    slot_usage:
+      name:
+        recommended: true
+        annotations:
+          sh:order: 1
+      description:
+        annotations:
+          sh:order: 2
+          dash:singleLine: false
+      display_label:
+        recommended: true
+        annotations:
+          sh:order: 3

src/flat-data/unreleased/examples/Study-1.json

@@ -34,11 +34,13 @@
     "inm7:sub/hgd54732": {
       "pid": "inm7:sub/hgd54732",
       "schema_type": "inm7fd:Subject",
+      "study": "inm7:study/demo",
       "name": "HGD54732"
     },
     "inm7:studyact/demo/sub1-sess1-demographics": {
       "pid": "inm7:studyact/demo/sub1-sess1-demographics",
       "schema_type": "inm7fd:StudyActivity",
+      "study": "inm7:study/demo",
       "factors": [
         "inm7:fac/site/fzj"
       ],
@@ -48,7 +50,6 @@
       "implements": [
         "inm7:prot/demographics-v1"
       ],
-      "study": "inm7:study/demo",
       "subjects": [
         "inm7:sub/hgd54732"
       ]

src/flat-data/unreleased/examples/Study-1.yaml

@@ -27,6 +27,7 @@ relations:
   inm7:sub/hgd54732:
     schema_type: inm7fd:Subject
     name: HGD54732
+    study: inm7:study/demo
   inm7:studyact/demo/sub1-sess1-demographics:
     schema_type: inm7fd:StudyActivity
     study: inm7:study/demo