Study-related concepts for data annotations #77

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opened 2025-05-26 08:39:49 +00:00 by mih · 0 comments

mih commented

2025-05-26 08:39:49 +00:00

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erDiagram
    direction LR
    DATASET {
        is_a Entity
    }
    DATASET }|..|{ DATAITEM : part
    DATASET }|..|{ STUDY : generated_by

    STUDY {
        is_a Activity
    }
    STUDY }|..|{ DIMENSION : dimension
    STUDY }|..o{ FACTOR : factor
    STUDY }|..o{ INSTRUMENT : instrument
    STUDY }|..|{ PROTOCOL : protocol
    STUDY }|..|{ SUBJECT : subject

    PROTOCOL {
        is_a Entity
    }

    SUBJECT {
        is_a Entity
    }
    SUBJECT ||..|| SUBJECT : specimen_of
    SUBJECT ||..|| PROCEDURE : generated

    PROCEDURE {
        is_a Activity
    }
    PROCEDURE }|..|{ INSTRUMENT : used
    PROCEDURE }|..|{ PROTOCOL : implements
    PROCEDURE }|..|{ SUBJECT : study

    INSTRUMENT {
        is_a Entity
    }

    FACTOR {
        is_a Entity
    }
    FACTOR ||..o{ FACTOR : levels
    FACTOR }|..|{ PROCEDURE : influence

    DIMENSION {
        is_a Entity
    }

    DATAITEM {
        is_a Entity
        literal value
        pid unit
        pid distribution
    }
    DATAITEM }|..|| PROCEDURE : generated
    DATAITEM }|..|| SUBJECT : derived
    DATAITEM }|..|| DIMENSION : dimension

This is already being implemented.

```mermaid erDiagram direction LR DATASET { is_a Entity } DATASET }|..|{ DATAITEM : part DATASET }|..|{ STUDY : generated_by STUDY { is_a Activity } STUDY }|..|{ DIMENSION : dimension STUDY }|..o{ FACTOR : factor STUDY }|..o{ INSTRUMENT : instrument STUDY }|..|{ PROTOCOL : protocol STUDY }|..|{ SUBJECT : subject PROTOCOL { is_a Entity } SUBJECT { is_a Entity } SUBJECT ||..|| SUBJECT : specimen_of SUBJECT ||..|| PROCEDURE : generated PROCEDURE { is_a Activity } PROCEDURE }|..|{ INSTRUMENT : used PROCEDURE }|..|{ PROTOCOL : implements PROCEDURE }|..|{ SUBJECT : study INSTRUMENT { is_a Entity } FACTOR { is_a Entity } FACTOR ||..o{ FACTOR : levels FACTOR }|..|{ PROCEDURE : influence DIMENSION { is_a Entity } DATAITEM { is_a Entity literal value pid unit pid distribution } DATAITEM }|..|| PROCEDURE : generated DATAITEM }|..|| SUBJECT : derived DATAITEM }|..|| DIMENSION : dimension ``` This is already being implemented.