datalad-handbook/docs/usecases/_examples/repro2-119
Adina Wagner 5235189002 rebuild most advanced sections and usecases
The DVC section currently fails due to a DVC issue
(refuses to find an installed shared library file)
and the FSL neuroimaging usecase picked a fight with
FSL that looked like an environment issue.
I postponed troubleshooting them.
2022-12-15 16:07:38 +01:00

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$ datalad run \
-m "FSL FEAT analysis config script" \
--output sub-02/1stlvl_design.fsf \
bash -c 'sed -e "s,##BASEPATH##,{pwd},g" -e "s,##SUB##,sub-02,g" \
code/ffa_design.fsf > {outputs}'
[INFO] == Command start (output follows) =====
[INFO] == Command exit (modification check follows) =====
run(ok): /home/me/usecases/repro2/glm_analysis (dataset) [bash -c 'sed -e "s,##BASEPATH##,/home/me...]
add(ok): sub-02/1stlvl_design.fsf (file)
save(ok): . (dataset)