datalad-handbook/docs/usecases/_examples/ml-133
Adina Wagner 5235189002 rebuild most advanced sections and usecases
The DVC section currently fails due to a DVC issue
(refuses to find an installed shared library file)
and the FSL neuroimaging usecase picked a fight with
FSL that looked like an environment issue.
I postponed troubleshooting them.
2022-12-15 16:07:38 +01:00

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$ datalad rerun --branch="randomforest" -m "Recompute classification with random forest classifier" ready4analysis..SGD-100
[INFO] checkout commit 26cb94c;
[INFO] run commit 709aaeb; (Train an SGD clas...)
[INFO] Making sure inputs are available (this may take some time)
[INFO] Unlocking files
unlock(ok): model.joblib (file)
[INFO] Recording unlocked state in git
[INFO] Completed unlocking files
[INFO] == Command start (output follows) =====
[INFO] == Command exit (modification check follows) =====
run(ok): /home/me/usecases/ml-project (dataset) [singularity exec -B /home/me/usecases/ml...]
add(ok): model.joblib (file)
save(ok): . (dataset)
[INFO] run commit 69075b4; (Evaluate SGD clas...)
[INFO] Making sure inputs are available (this may take some time)
[INFO] == Command start (output follows) =====
{'accuracy': 0.8060836501901141}
[INFO] == Command exit (modification check follows) =====
run(ok): /home/me/usecases/ml-project (dataset) [singularity exec -B /home/me/usecases/ml...]
add(ok): accuracy.json (file)
add(ok): code/__pycache__/train.cpython-37.pyc (file)
save(ok): . (dataset)
[INFO] skip-or-pick commit 4e026c6; 4e026c6 does not have a command; skipping or cherry picking
run(ok): /home/me/usecases/ml-project (dataset) [4e026c6 does not have a command; skipping]
action summary:
add (ok: 3)
get (notneeded: 8)
run (ok: 3)
save (notneeded: 2, ok: 2)
unlock (notneeded: 2, ok: 1)